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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939541.1_cds_XP_016484078.1_75128
CDS Infomation

[gene=LOC107804670] [db_xref=GeneID:107804670] [protein=probable LRR receptor-like serine/threonine-protein kinase At3g47570] [protein_id=XP_016484078.1] [location=join(40819..43495,44434..44782,45911..46090,46509..46758)] [gbkey=CDS]
Sequence

ATGAAGTCTTTTAATGCTTTCCTTTGTCTTATGCTTTCTTGCTTATTATGTGTTGTTTCT
ACAGTTGCATCTTCCAAACTTGCTGGAAATGAAACTGATAGATTAGCCCTTCTCAGCATC
AAAGGACAAATAACTTATGATCCTTTTGGTGTTATGTATTCTTGGAACGATTCATTCCAT
CATTGCAGCTGGCAAGGCGTTACATGTAGCAAGCGACATCAAAGGGTGACTTTGCTGGAT
TTAAGCTCCAAACAGCTTGTAGGAACAATAGTTCCTCATATAGGAAATATGAGTTTTCTT
AGAAAACTAACTCTTCGAAATAACACCATCAACGGTGAGATACCACAGGAAATCGGAAGA
TTATTCAGGTTACAGAACTTAGAGCTCGCGAACAACTCATTTACTGGTGAAATTCCAGTG
GAACTTTCAAATTGCTCTAGGCTCATATATCTTGATTTGGATGGTAACAGACTGACCGGG
AAAATCCCTGTGGAGCTTGGTTTGTATTTAAGAAATCTTCAGGTACTTTTTCTTAGATCA
AATAATTTAACAGGAGAGTTGCCATATTCTTTAGGTAATCTTTCATCTCTAATTGCCTTA
GCAGCACCAGAGAATAGATTAGAAGGAAGTATACCATATTCATTAGGCCAATTGACTAAC
TTGAGCTATATTTCTCTTGGTGCTAATATGATTTCTGGTGATATTCCCATTTCACTCTTC
AACTTATCATCTCTTTATCATTTTGCTGCTCCAGTTAACCAACTTAAAGGAAGTCTTCCT
ATAGATATTGGATCGACTCTTCCAAGTCTTCGCTTACTTTATTTGCACTCGAACTTATTG
AATGGAGTGGTTCCAAGTTCCATTTCTAATTTAACGAGACTTGAAATTATCTCATTATCA
AGAAACCAGTTGTCCGGGAAAATCCCTTCTCTGGAAAATCTCCATAACCTTCGGGGACTA
GGAATGCATTTCAATAATCTTGGAACCGGGAGAGAAGATGACATGGATTTCTTTTCTTCC
TTGGTTAACATTACCAGTTTTCGAGAACTGAGTTTGAGTGTGAATAATATAGGAGGCCAG
TTGCCTAAGAATATTGGCAACTTCTCAACCAAGTTTAGATCTATTGGTTTTGCTAGGAAC
AAACTATTCGGACGAATACCTGATGGATTTGTAAGTCTCAGCAACATGGAAATAGTAAGT
TTGGAGTATAACCAATTGACTGGTGAATTTCCAGTTAATCTTGGCAAACTTCAAAAGCTC
AAGTATTTCTATGTTAATGGAAACAAACTTTCTGGAAAAATCCCTTCTTCCATTGGAAAC
TTGACATCCTTGTATGGACTTAATCTAGCTCAGAACAATTTAGAAGGGACAATTCCTTCA
GTTCTTGGAAATTGCCAGTTGTTGCAAATGTTGTATCTTTCTGGAAACAGACTCAGCGGC
GCAATACCAAAAGAGGTCCTCAGTATCTCAGCCTTGTCAATCCAACTAGACCTGTCCGGA
AATCAGTTAAGTGGCACTCTTCCCCTTGAAATAGGAAGTTTAGTCAATCTCGGGTATCTT
GATATCTCCGATAACAAGTTATCTGGAAAACTTCCTAGCACTTTAGGAAGTTGCATTAGG
TTGGAAAATCTCTATGTTCAAGGTAACATGTTTGAAGGTGTGATCCCGTCGCCTTTAAGC
TCCTTGAAAGGGCTTGCATATTTGGACTTTTCGCGTAATAATTTCTCTGGTGTTATTCCT
AAGTACTTTGAAACTTTTTCATCCTTGAAAAGCTTAAACATGTCGTTTAATAATTTTGAG
GGTGAAGTACCCCAAGGGGGAGTTTTCAGTAATGCAAGTGGAGCAATAATCAGCGGAAAC
AGAAATCTTTGTGGAGGTTCTCAAGTGCTAAAGCTACCACAATGTAAAGATTCAATGCCA
AAGAAGGGAAGATTATCACCAACTCTAAAGATAATTATTTCTGTTGCTTGTAGTTTATTT
GGAGTAATGCTAGTTTTGGTAGGCGTAGTTTTCTGTATTTTAAGGAGGAAGAAACATAGC
GCTTCACCCTATTTACCAGATGATTCATTTTTGAAAATCTCCTATGGTGAACTGCTGAAA
GCAACCAATGGATTCTCTTCAGAAAATCTCATTGGTAAGGGTGGTTTTGGTTGTGTATAC
AAAGGAATTCTTGGTTCAGATGAGAAAAATGTCGCGATCAAAGTACTTGATTTGCAGCAT
AGAGGAGCTTTAAAGAGCTTTATTGCAGAATGTGAAGTTCTAAAGAACCTTAGGCATAGA
AATCTTGTCAAGTTAGTAACTGCATGTTCAGGTACTGATTTTCAGGGCAATGATTTTAAG
GCCCTGATTTACGAGTTCATGGTTAACGGTAGCCTGGACGATTGGCTGCATTCATTTTCC
ATTGATGGAAGTCTGCACGTACTACATCTAGATCTTTATCAGAGAGTAAATGTTGCAATT
GATATTGCTTTCGCGCTAGAGTATCTTCATCATGGAAGCCAAATACCAGTTGTTCATTGT
GATTTGAAGCCGAGCAATGTCTTACTAGACATGGACATGACTGCCCGTGTTGGCGATTTT
GGTATGTCAAGGTTCCTCCAAGAAACAGCTCAGCAAACTTCACCAAGAAAAACTAGCACT
ATTGGTATTAAAGGATCAATTGGCTATGCAGCTCCAGAATATGGAATGGGAAGTGAAGTG
TCAACTTTAGGTGACATATACAGCTATGGCATTATCATATTGGAGATGATTACAGGGAAA
AAGCCGACAGACGACGCCTTTTCAAATGGATTGAACCTTCACAACTATGTTAAAATGGCT
TTCTCTGCTGGTAGAGTTATAGAAATTGTTGATCCAATGATTTGCCACAACTTGCAAGAA
GAGGAGACCACCAACACTATTGCTGAAAGGAAAACCAAAGATTACATTAGAGAGTGCTTA
ATTTTTATGTGTAAAATTGGGATTGCTTGCACTATGGAATCACCAAAAGAAAGAATGGGA
CTTAGTGATGTTGTTAAAGAGTTGCACAAAGTACACAGTTCCGTTGAAGTGGAGTCTCCC
GTTGGCCTGCTTCCAGTATACCTTAGTATCCAATTGCTTGTTGAATTGCGGAAGACCCCT
CCCAATCCATATTTAGGAGGCGTGCCAGTGGAGGAGTCATCAGTATTAAGCTTAATGGTT
CCTCCAGTGAGTGGTTCCCATTTGACAATTTCATCCGCTGCCGCAATCAAAGAAGAAAAA
CTCAACAAACGTTTGAGCAAATTGCGGATCGCACATGAATTGTGCGGCCGCAAAAGCTGG
GCTAGGATCCAAGATCAGAGAGATGACAAAAAGCCAAGTCCAGAGTTTCCTCAAATTGCG
GTCCGCACAAAATTTGTGCGGCCGCAGAAGATTATCTTGCGGTTGCAATCATACTATTGC
GGACCGCAAAAGAGTACCTTGCGGCCGCAGTGCTAA

Peptide Sequence

PEP ID

XP_016484078.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Nicotiana tabacum]
Sequence

MKSFNAFLCLMLSCLLCVVSTVASSKLAGNETDRLALLSIKGQITYDPFGVMYSWNDSFH
HCSWQGVTCSKRHQRVTLLDLSSKQLVGTIVPHIGNMSFLRKLTLRNNTINGEIPQEIGR
LFRLQNLELANNSFTGEIPVELSNCSRLIYLDLDGNRLTGKIPVELGLYLRNLQVLFLRS
NNLTGELPYSLGNLSSLIALAAPENRLEGSIPYSLGQLTNLSYISLGANMISGDIPISLF
NLSSLYHFAAPVNQLKGSLPIDIGSTLPSLRLLYLHSNLLNGVVPSSISNLTRLEIISLS
RNQLSGKIPSLENLHNLRGLGMHFNNLGTGREDDMDFFSSLVNITSFRELSLSVNNIGGQ
LPKNIGNFSTKFRSIGFARNKLFGRIPDGFVSLSNMEIVSLEYNQLTGEFPVNLGKLQKL
KYFYVNGNKLSGKIPSSIGNLTSLYGLNLAQNNLEGTIPSVLGNCQLLQMLYLSGNRLSG
AIPKEVLSISALSIQLDLSGNQLSGTLPLEIGSLVNLGYLDISDNKLSGKLPSTLGSCIR
LENLYVQGNMFEGVIPSPLSSLKGLAYLDFSRNNFSGVIPKYFETFSSLKSLNMSFNNFE
GEVPQGGVFSNASGAIISGNRNLCGGSQVLKLPQCKDSMPKKGRLSPTLKIIISVACSLF
GVMLVLVGVVFCILRRKKHSASPYLPDDSFLKISYGELLKATNGFSSENLIGKGGFGCVY
KGILGSDEKNVAIKVLDLQHRGALKSFIAECEVLKNLRHRNLVKLVTACSGTDFQGNDFK
ALIYEFMVNGSLDDWLHSFSIDGSLHVLHLDLYQRVNVAIDIAFALEYLHHGSQIPVVHC
DLKPSNVLLDMDMTARVGDFGMSRFLQETAQQTSPRKTSTIGIKGSIGYAAPEYGMGSEV
STLGDIYSYGIIILEMITGKKPTDDAFSNGLNLHNYVKMAFSAGRVIEIVDPMICHNLQE
EETTNTIAERKTKDYIRECLIFMCKIGIACTMESPKERMGLSDVVKELHKVHSSVEVESP
VGLLPVYLSIQLLVELRKTPPNPYLGGVPVEESSVLSLMVPPVSGSHLTISSAAAIKEEK
LNKRLSKLRIAHELCGRKSWARIQDQRDDKKPSPEFPQIAVRTKFVRPQKIILRLQSYYC
GPQKSTLRPQC

Transcript Sequence

Gene sequence data has not been registered.